Tracking Stan sampling progress in Shiny

Introduction The previous post demonstrates the use of pre-compiled Stan models in interactive R Shiny applications to avoid unnecessary Stan model (re-)compilation on application start-up. In this short follow-up post we go a step further and tackle the issue of tracking the Stan model sampling progress itself in a shiny-application.

Running compiled Stan models in Shiny

Introduction The aim of this post is to provide a short step-by-step guide on writing interactive R Shiny-applications that include models written in Stan using rstan and rstantools. The remainder of this post assumes a small amount of working knowledge on writing models in Stan and usage of the package rstan to interface Stan from R.